Research Progress of Zinc Finger Protein Gene in Rice

doi:10.3969/j.issn.1006-8082.2013.06.006

Abstract

摘要： 对已报道的43个水稻锌指蛋白基因进行归类，综述了锌指蛋白类型、锌指蛋白结构特点及其基因功能等研究进展，并对锌指蛋白未来研究方向进行了展望。

关键词: 水稻, 锌指蛋白, 锌指结构, 基因功能

CLC Number:

S511

吴程英1# ,钟时伟2#. 水稻锌指蛋白基因研究进展[J]. 中国稻米, 2013, 19(6): 23-28.

[1]    Hoovers J M，Mannens M，John R，et al． High-resolution localization of 69 potential human zinc finger protein genes：a number are clustered[J]． Genomics，1992，12（2）：254-263.

[2]    Henikoff S，Greene E A，Pietrokovski S，et al．Gene families：the taxonomy of protein paralogs and chimeras[J]． Science，1997，278（5338）：609-614.

[3]    Mendez V C，Wilhelm M，Hellborg F，et al． The p53-induced mouse zinc finger protein wig-1 binds double-stranded RNA with high affinity[J]． Nucleic Acids Research，2002，30（9）：1991-1996.

[4]    Espinosa J M，Portal D，Lobo G S，et al． Trypanosoma cruzi poly-zinc finger protein：a novel DNA/RNA-binding CCHC-zinc finger protein[J]． Mol Biochem Parasit，2003，131（1）：35-44.

[5]    Jauch R，Bourenkov G P，Chung H R，et al． The zinc finger associated domain of the drosophila transcription factor grauzone is a novel zinc-coordinating protein-protein interaction modules[J]． Structure，2003，11（11）：1393-1402.

[6]    Li J，Jia D，Chen X． HUA1，a regulator of stamen and carpel identities in arabidopsis，codes for a nuclear RNA binding protein[J]． Plant Cell，2001，13（10）：2269-2281.

[7]    黄骥，张红生，曹雅君，等．一个新的水稻C2H2型锌指蛋白cDNA的克隆与序列分析[J]．南京农业大学学报，2002，25（2）：110-112.

[8]    Berg J M，Shi Y． The galvanization of biology: a growing appreciation for the roles of zinc[J]． Science，1996，271（5252）：1081-1085.

[9]    Takatsuji H．Zinc-finger transcription factors in plants[J]． Cell Mol Life Sci，1998，54（6）：582-596.

[10] Krishna S S，Majumdar I，Grishin N V．Structural classification of zinc fingers[J]． Nucleic Acids Res，2003，31（2）：532-550.

[11] 周畅，李麓芸． C2H2型锌指蛋白的研究进展[J]．生命科学研究，2004，8（3）：215-220.

[12] 普燕，李琦涵． KRAB锌指蛋白的研究进展[J]．生命的化学，2004，24（2）：144-147.

[13] Wang D，Guo Y H，Wu C A，et al． Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice[J]． BMC Genomics，2008，9：44-64.

[14] 黄骥．水稻非生物胁迫相关锌指蛋白基因的克隆与功能分析[D]．南京：南京农业大学，2005.

[15] Huang J，Wang J，Zhang H． Rice ZFP15 gene encoding for a novel C2H2-type zinc finger protein lacking DLN box is regulated by spike development but not by abiotic stresses[J]． Mol Biol Rep，2005，32（3）：177-183.

[16] 李余生，黄骥，禹山林，等．一个水稻穗特异表达锌指蛋白基因的克隆与结构分析[J]．中国水稻科学，2006，20（4）：343-347.

[17] 江燕．水稻和拟南芥TFⅢA型锌指蛋白基因家族的鉴定及ZFP207基因的功能研究[D]．南京：南京农业大学，2007.

[18] 郭书巧，黄骥，江燕，等．水稻C2H2型锌指蛋白基因RZF71的克隆与表达分析[J]．遗传，2007，29 （5）：607-613.

[19] 杨霞．两个水稻金属离子转运体基因和两个水稻基因的克隆与功能研究[D]．南京：南京农业大学，2007.

[20] Huang J，Wang J，Wang Q，et al. Identification of a rice zinc finger protein whose expression is transiently induced by drough，cold but not by salinity and abscisic acid DNA[J]． Sequence，2005，16（2）：130-136.

[21] Xu D Q，Huang J，Guo S Q，et al． Overexpression of a TFIIIA-type zinc finger protein gene ZFP252 enhances drought and salt tolerance in rice（Oryza sativa L）[J]． Febs Letters，2008，582（7）：1037-1043.

[22] Xiao H，Tang J，Li Y，et al． STAMENLESS 1，encoding a single C2H2 zinc finger protein，regulates floral organ identity in rice[J]． Plant J，2009，59（5）：789-801.

[23] Huang X Y，Chao D Y，Gao J P，et al． A previously unknown zinc finger protein　DST　regulates drought and salt tolerance in rice via stomatal aperture control[J]． Genes Development，2009，23（15）：1805-1817.

[24] Yamaji N，Huang CF，Nagao S，et al． A zinc finger transcription factor ART1 regulates multiple genes implicated in aluminum tolerance in rice[J]． Plant Cell，2009，21（10）：3339-3349.

[25] 王曼玲，Rocha Pedro，李落叶，等．水稻多逆境诱导基因OsMsr4的克隆与表达分析[J]．生物技术通报，2009 （7）：68-75.

[26] Sun S J，Guo S Q，Yang X，et al． Functional analysis of a novel Cys2/His2-type zinc finger protein involved in salt tolerance in rice[J]． J Exp Bot，2010，61（10）：2807-2818.

[27] 孙琦，刘香玲，张宁，等．水稻苗期低温诱导表达新基因OsCOI的克隆、过表达载体的构建与转化[J]．华北农学报，2010，25（1）：18-22.

[28] 玉晓红，曾正明，苗雁文，等.水稻锌指蛋白基因OsZRL过表达对根系发育的影响[J]．山西农业大学学报，2011，31（4）：343-348.

[29] Kong Z，Li M，Yang W，et al． A novel nuclear-localized CCCH-type zinc finger protein，OsDOS，is involved in delaying leaf senescence in rice（Oryza sativa L）[J]． Plant Physiol，2006，141（4）：1376-1388.

[30] 徐桂磊．水稻种子发育特异性表达锌指基因的筛选及功能分析[D]．福建：福建师范大学，2006

[31] Arumugam T U，Davies E，Morita E H，et al． Sequence，expression and tissue localization of a gene encoding a makorin RING zinc-finger protein in germinating rice（Oryza sativa L.ssp.Japonica）seeds[J]． Plant Physiol Bioch，2007，45（10-11）：767-780.

[32] 刘梅芳．一个水稻CCCH型锌指蛋白基因OsZF142功能的分析[D]．福建：福建师范大学，2008.

[33] 刘梅芳，周淑芬，徐桂磊，等．一个水稻CCCH型锌指蛋白基因的表达模式分析[J]．福建农业学报，2008，23（3）：225-230.

[34] Deng H，Liu H，Li X，et al． A CCCH-type zinc finger nucleic acid-binding protein quantitatively confers resistance against rice bacterial blight disease[J]． Plant Physiol，2012，158（2）：876-889.

[35] Zhang C，Zhang F，Zhou J，et al．Overexpression of a phytochrome-regulated tandem zinc finger protein gene，OsTZF1，confers hypersensitivity to ABA and hyposensitivity to red light and far-red light in rice seedlings[J]． Plant Cell Rep，2012，31（7）：1333-1343.

[36] Soren K R，Ali K，Tyagi A． Cloning and characterization of a gene encoding novel zinc finger protein transcription factor induced under water deficit stress from rice （Oryza sativa） cv. N-22[J]． Indian J Biochem Biophys，2012，49（1）：36-41.

[37] Wang L，Xu Y，Zhang C，et al． OsLIC，a novel CCCH-type zinc finger protein with transcription activation，mediates rice architecture via brassinosteroids signaling[J]． PLoS One，2008，3（10）：e3521.

[38] Zhang C，Xu Y，Guo S，et al． Dynamics of brassinosteroid response modulated by negative regulator LIC in rice[J]． PLoS Genetics，2012，8（4）：e1002686.

[39] Wang L，Pei Z，Tian Y，et al． OsLSD1，a rice zinc finger protein，regulates programmed cell death and callus differentiation[J]. Mol Plant Microbe Interact，2005，18（5）：375-384.

[40] Xu C，He C． The rice OsLOL2 gene encodes a zinc finger protein involved in rice growth and disease resistance[J]. Mol Genet Genomics，2007，278（1）：85-94.

[41] Mukhopadhyay A，Vij S，Tyagi A K． Overexpression of a zinc-finger protein gene from rice confers tolerance to cold，dehydration and salt stress in transgenic tobacco[J]． PNAS，2004，101（16）：6309-6314.

[42] 黄越敏，胡红红，武从庆．一个逆境诱导表达的水稻锌指蛋白基因的分离和鉴定[J]．华中农业大学学报，2006，25（6）：581-585.

[43] Huang J，Wang M M，Jiang Y，et al． Expression analysis of rice A20/AN1-type zinc finger genes and characterization of ZFP177 that contributes to temperature stress tolerance[J]． Gene，2008，420（2）：135-144.

[44] Kanneganti V，Gupta A K．Overexpression of OsiSAP8，a member of stress associated protein （SAP） gene family of rice confers tolerance to salt，drought and cold stress in transgenic tobacco and rice[J]． Plant Mol Biol，2008，66（5）：445-462.

[45] Liu Y，Xu Y，Xiao J，et al． OsDOG，a gibberellin-induced A20/AN1 zinc-finger protein，negatively regulates gibberellin-mediated cell elongation in rice[J]． J Plant Physiol，2011，168（10）：1098-105.

[46] Meng X B，Zhao W S，Lin R M，et al． Molecular cloning and characterization of a rice blast-inducible RING-H2 type zinc finger gene[J]． DNA Seq，2006，17（1）：41-48.

[47] Koiwai H，Tagiri A，Katoh S，et al． RING-H2 type ubiquitin ligase EL5 is involved in root development through the maintenance of cell viability in rice[J]． Plant J，2007，51（1）：92-104.

[48] Liu H，Zhang H，Yang Y，et al． Functional analysis reveals pleiotropic effects of rice RING-H2 finger protein gene OsBIRF1 on regulation of growth and defense responses against abiotic and biotic stresses[J]． Plant Mol Biol，2008，68（1-2）：17-30.

[49] 滕永勇．水稻OsRINGzf基因的功能研究[D]．武汉：华中农业大学，2009.

[50] Liu K，Wang L，Xu Y，et al． Overexpression of OsCOIN，a putative cold inducible zinc finger protein，increased tolerance to chilling，salt and drought，and enhanced proline level in rice[J]． Planta，2007，226（4）：1007-1016.

[51] 朱天生．水稻OsSZF1基因的克隆与其功能初步分析[D]．武汉：华中农业大学，2007.

[52] 刘丽华，林玲，鲁国东，等．水稻一个C3HC4型锌指蛋白编码基因的克隆表达与分析[J]．中国农学通报，2009，25（15）：35-39.

[53] 黄骥，王建飞，张红生．植物C2H2型锌指蛋白的结构与功能[J]．遗传，2004，26（3）：414-418.

[54] 宋冰，洪洋，王丕武，等．植物C2H2型锌指蛋白的研究进展[J]．基因组学与应用生物学，2010，29（5）：1133-1141.

[55] 仇玉萍，荆邵娟，付坚，等． 13个水稻WRKY基因的克隆及其表达谱分析[J]．科学通报，2004，49（18）：1860-1869.

[56] 郗冬梅，朱东方．植物CCCH型锌指蛋白研究进展[J]．山东农业科学，2012，44（5）：20-22.

[57] Freemont P S． The RING finger．A novel protein sequence motif related to the zinc finger[J]． Ann N Y Acad Sci，1993，684：174-192.

Research Progress of Zinc Finger Protein Gene in Rice

水稻锌指蛋白基因研究进展

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